Job Description P29366 Confidence 98.65% Date Mon Jul 2 19:15:38 BST 2012 Rank 236 Aligned Residues 84 % Identity 18% Template c3fogA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin-17; PDBTitle: crystal structure of the px domain of sorting nexin-172 (snx17) Resolution 2.80 Å

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		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		D	E	K	Y	W	F	L	V	C	C	E	L	S	N	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q	W	S	K	R	I	M	P	Y	I	P	G	.	P	V	P	Y	V	T	N	S	I	T	K	K	R	K	E	D	L
Query Conservation																																																																.
Alig confidence												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	Y	V	A	Y	N	I	H	V	.	.	.	.	N	G	V	L	H	C	R	V	R	Y	S	Q	L	L	G	L	H	E	Q	L	R	K	E	Y	G	A	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	F	P	P	K	K	L	F	S	L	T	P	A	E	V	E	Q	R	R	E	Q	L
Template Known Secondary structure												.	.	.	.	T	T																								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S
Template Predicted Secondary structure												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		E	K	Y	M	Q	A	V	R	Q	.	D	P	L	L	G	S	S	E	T	F	N	S	F	L
Template Known Secondary structure											.						T
Template Predicted Secondary structure											.
Template SS confidence
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions