Job Description P29366 Confidence 57.14% Date Mon Jul 2 19:15:38 BST 2012 Rank 334 Aligned Residues 62 % Identity 16% Template c2rneA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1 Resolution UNK

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		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.						.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		I	F	A	L	M	L	K	G	D	T	T	Y	K	E	L	R	S	K	I	A	P	R	I	D	T	D	N	F	K	L	Q	T	K	L	F	D	G	S	.	.	.	.	.	G	E	E	I	K	T	D	S	Q	V	S	N	I	I	Q	A	K	L	K	I	S	V	H	D
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.
Template Conservation
Template Sequence		V	F	V	G	D	L	S	P	E	I	T	T	E	D	I	K	A	A	F	A	P	F	G	R	I	S	D	A	R	V	V	K	D	M	A	T	G	K	S	K	G	Y	G	F	V	S	F	F	N	K	W	D	A	E	N	A	I	Q	Q	M	G	G	Q	W	L	G	G
Template Known Secondary structure						S			T	T											G	G	G												T	T	T		S										S	S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions