Job Description P29366 Confidence 98.47% Date Mon Jul 2 19:15:38 BST 2012 Rank 242 Aligned Residues 106 % Identity 20% Template c2rajA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:sorting nexin-9; PDBTitle: so4 bound px-bar membrane remodeling unit of sorting nexin 9 Resolution 2.45 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																			.	.	.	.	.					.
Query SS confidence																			.	.	.	.	.					.
Query Sequence		D	G	E	L	L	V	K	A	S	V	E	S	F	G	L	E	D	.	.	.	.	.	E	K	Y	W	.	F	L	V	C	C	E	L	S	N	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q	W	S	K	R	I	M	P
Query Conservation																			.	.	.	.	.					.
Alig confidence																			.	.	.	.	.					.										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	T	S	T	F	D	C	V	V	A	D	P	R	K	G	S	K	M	Y	G	L	K	S	Y	I	E	Y	Q	L	T	P	T	N	T	N	.	.	.	R	S	V	N	H	R	Y	K	H	F	D	W	L	Y	E	R	L	L	V	K	F	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	P	I	P
Template Known Secondary structure				S	S														S	S			S											T	T	T		.	.	.																						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.														.	.	.	.	.
		353	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		Y	I	P	G	P	.	.	V	P	Y	V	T	N	S	I	T	K	K	R	K	E	D	L	N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F	V	V	L	N
Query Conservation							.	.
Alig confidence							.	.																									.
Template Conservation																																	.
Template Sequence		S	L	P	D	K	Q	V	T	G	R	F	E	E	E	F	I	K	M	R	M	E	R	L	Q	A	W	M	T	R	M	C	.	R	H	P	V	I	S	E	S	E	V	F	Q	Q	F	L	N	F	R	D
Template Known Secondary structure									T	T		S	S																				.	T		T	T	G	G	G	S								S			S
Template Predicted Secondary structure																																	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions