Job Description P29366 Confidence 41.17% Date Mon Jul 2 19:15:38 BST 2012 Rank 363 Aligned Residues 60 % Identity 13% Template c2ojrA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin; PDBTitle: structure of ubiquitin solved by sad using the lanthanide-2 binding tag Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520	.
Predicted Secondary structure																											.																												.	.
Query SS confidence																											.																												.	.
Query Sequence		L	S	G	S	K	Q	A	P	A	Q	S	T	S	G	L	K	T	T	K	I	K	F	Y	Y	K	.	D	D	I	F	A	L	M	L	K	G	D	T	T	Y	K	E	L	R	S	K	I	A	P	R	I	D	T	.	.	D	N	F	K	L	Q	T	K
Query Conservation																											.																												.	.
Alig confidence																											.																												.	.
Template Conservation
Template Sequence		Y	I	D	T	N	N	D	G	W	I	E	G	D	E	L	L	A	M	Q	I	F	V	K	T	L	T	G	K	T	I	T	L	E	V	E	P	S	D	T	I	E	N	V	K	A	K	I	Q	D	K	E	G	I	P	P	D	Q	Q	R	L	I	F	A
Template Known Secondary structure					T	T		S	S	S			G	G	G	S	S									S	S	S									T	T		B																T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions