Job Description P29366 Confidence 99.50% Date Mon Jul 2 19:15:38 BST 2012 Rank 67 Aligned Residues 70 % Identity 24% Template c2jmcA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:spectrin alpha chain, brain and p41 peptide PDBTitle: chimer between spc-sh3 and p41 Resolution UNK

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	Q	T	S	K	E	L	S	F	M	E	G	E	F	F	Y	V	S	G	D	.	E	K	D	W	Y	K	A	S	N	P	S	T	G	K	E	G	V	V	P	K	T	Y	F	E	V	F	D	R	T	K	P	S	S	V	N	G	S	N	S	S	S	R	K	V	T	N	D	S	L	N	M	G	S	L	Y	A	I	V	L
Query Conservation																						.
Alig confidence																						.									.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	G	P	R	E	V	T	M	K	K	G	D	I	L	T	L	L	N	S	T	N	K	D	W	W	K	V	E	.	.	V	N	D	R	Q	G	F	V	P	A	A	Y	V	K	K	L	D	S	G	T	G	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	L
Template Known Secondary structure			S	S	S							T	T											S	S						.	.		T	T							G	G	G							S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																						.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	F	K	A	E	K	A	D	E	L	T	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	Y	Q	E	S	G	D	N	A	P	S	Y	S
Template Known Secondary structure		S					S	S						S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions