Job Description P29366 Confidence 76.81% Date Mon Jul 2 19:15:38 BST 2012 Rank 309 Aligned Residues 61 % Identity 13% Template c2ekeC_ PDB info PDB header:ligase/protein binding Chain: C: PDB Molecule:ubiquitin-like protein smt3; PDBTitle: structure of a sumo-binding-motif mimic bound to smt3p-2 ubc9p: conservation of a noncovalent ubiquitin-like3 protein-e2 complex as a platform for selective4 interactions within a sumo pathway Resolution 1.90 Å

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		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		L	S	L	S	G	S	K	Q	A	P	A	Q	S	T	S	G	L	K	T	T	K	I	K	F	Y	Y	K	D	D	I	F	A	L	M	L	K	G	D	T	T	Y	K	E	L	R	S	K	I	A	P	R	I	D	T	.	.	D	N	F	K	L	Q	T
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		D	P	L	V	P	R	G	S	E	V	K	P	E	V	K	P	E	T	H	I	N	L	K	V	S	D	G	S	S	E	I	F	F	K	I	K	K	T	T	P	L	R	R	L	M	E	A	F	A	K	R	Q	G	K	E	M	D	S	L	R	F	L	Y
Template Known Secondary structure																			S									S	S									T	T	S		T												T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions