Job Description P29366 Confidence 79.04% Date Mon Jul 2 19:15:38 BST 2012 Rank 306 Aligned Residues 79 % Identity 11% Template c2dhzA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rap guanine nucleotide exchange factor (gef)- PDBTitle: solution structure of the ra domain in the human link2 guanine nucleotide exchange factor ii (link-gefii) Resolution UNK

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		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.									.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																				.																											.	.	.	.	.	.	.	.													.
Query SS confidence																				.																											.	.	.	.	.	.	.	.													.
Query Sequence		Q	S	T	S	G	L	K	T	T	K	I	K	F	Y	Y	K	D	D	.	I	F	A	L	M	L	K	G	D	T	T	Y	K	E	L	R	S	K	I	A	P	R	I	D	T	D	.	.	.	.	.	.	.	.	N	F	K	L	Q	T	K	L	F	D	G	S	.	G	E	E	I	K	T	D	S	Q	V	S	N	I	I
Query Conservation																				.																											.	.	.	.	.	.	.	.													.
Alig confidence																				.																											.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		S	S	G	S	S	G	D	E	I	F	C	R	V	Y	M	P	D	H	S	Y	V	T	I	R	S	R	L	S	A	S	V	Q	D	I	L	G	S	V	T	E	K	L	Q	Y	S	E	E	P	A	G	R	E	D	S	L	I	L	V	A	V	S	S	S	G	E	K	V	L	L	Q	P	T	E	D	C	V	F	T	A	L
Template Known Secondary structure					S	S											T	T	S									T	T														S	T	T		S	S	T	T	S			S									T	T								T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		541	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	K	L	K	I	S	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	S	H	L	F	A	C
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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