Job Description P29366 Confidence 98.95% Date Mon Jul 2 19:15:38 BST 2012 Rank 223 Aligned Residues 113 % Identity 14% Template c2cskA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin 12; PDBTitle: solution structure of px domain from human snx12 Resolution UNK

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.					.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.												.	.	.	.
Query SS confidence																								.	.	.	.												.	.	.	.
Query Sequence		A	K	L	V	D	G	E	L	L	V	K	A	S	V	E	S	F	G	L	E	D	E	.	.	.	.	K	Y	W	F	L	V	C	C	E	L	S	.	.	.	.	N	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q	W
Query Conservation																								.	.	.	.												.	.	.	.
Alig confidence																								.	.	.	.												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	G	S	S	G	S	N	F	L	E	I	D	I	F	N	P	Q	T	V	G	V	G	R	A	R	F	T	T	Y	E	V	R	M	R	T	N	L	P	I	F	K	L	K	E	S	C	V	R	R	R	Y	S	D	F	E	W	L	K	N	E	L	E	R	D	S	K	I	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S														S	S	S	S	S														S	S	S	S		S																			S	S	S	S	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.												.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	R	I	M	P	Y	I	P	G	P	V	P	Y	V	.	.	.	.	.	.	.	.	.	.	.	T	N	S	I	T	K	K	R	K	E	D	L	N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F	V	V	L	N	N	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.	.																																													.
Template Sequence		.	.	.	.	V	P	P	L	P	G	K	A	L	K	R	Q	L	P	F	R	G	D	E	G	I	F	E	E	S	F	I	E	E	R	R	Q	G	L	E	Q	F	I	N	K	I	A	G	H	.	P	L	A	Q	N	E	R	C	L	H	M	F	L	Q	E	E	A	I	D
Template Known Secondary structure		.	.	.	.					S							S	S	T	T				S	S																									.													T	T		S	S
Template Predicted Secondary structure		.	.	.	.																																													.
Template SS confidence
						71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions