Job Description P29366 Confidence 98.64% Date Mon Jul 2 19:15:38 BST 2012 Rank 237 Aligned Residues 113 % Identity 17% Template c1ocuA_ PDB info PDB header:sorting protein Chain: A: PDB Molecule:sorting nexin; PDBTitle: crystal structure of the yeast px-domain protein grd19p2 (sorting nexin 3) complexed to3 phosphatidylinosytol-3-phospahte. Resolution 2.3 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.												.	.	.	.
Query SS confidence																								.	.	.	.	.	.												.	.	.	.
Query Sequence		K	L	V	D	G	E	L	L	V	K	A	S	V	E	S	F	G	L	E	D	E	K	.	.	.	.	.	.	Y	W	F	L	V	C	C	E	L	S	N	.	.	.	.	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q
Query Conservation																								.	.	.	.	.	.												.	.	.	.
Alig confidence																								.	.	.	.	.	.												.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	P	E	N	F	L	E	I	E	V	H	N	P	K	T	H	I	P	N	G	M	D	S	K	G	M	F	T	D	Y	E	I	I	C	R	T	N	L	P	S	F	H	K	R	V	S	K	V	R	R	R	Y	S	D	F	E	F	F	R	K	L	I	K	E	I	S	M	L	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure				S	S															T	T	S	S	S	S	T	T														T	T		S	S	S																								T	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		W	S	K	R	I	M	P	Y	I	P	G	P	V	P	Y	.	.	.	V	T	N	S	I	T	K	K	R	K	E	D	L	N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F	V
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		H	P	K	V	M	V	P	H	L	P	G	K	I	L	L	S	N	R	F	S	N	E	V	I	E	E	R	R	Q	G	L	N	T	W	M	Q	S	V	A	G	H	P	L	L	Q	S	G	S	K	V	L	V	R	F	I	E
Template Known Secondary structure			T	T							S					T	T	G	G	G	S																				T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions