 |
Job Description | O13297 | Confidence | 5.60% | Date | Mon Jul 2 19:10:04 BST 2012 |
Rank | 74 | Aligned Residues | 52 |
% Identity | 12% | Template | c2rmrA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:paired amphipathic helix protein sin3a; |
PDBTitle: solution structure of msin3a pah1 domain
|
Resolution | UNK |
|
 |
  |   |
498 | . | 500 | . | . | . | . | . | . | . | |
. | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | |
|
. | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | P | A | L | L | N | A | F | D | . |
N | I | T | N | D | S | K | E | Y | A | S | L | I | R | T | F | L | N | . |
. |
N | G | T | I | I | R | R | K | L | S | S | L | S | Y | E | I | F | E | G | S | K | K | V | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   | . | . |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|
|
Template Sequence |   |
D | A | L | S | Y | L | D | Q | V | K | L | Q | F | G | S | Q | P | Q | V | Y | N | D | F | L | D | I | M | K | E | F | K | S | Q | S | I | D | T | P | G | V | I | S | R | V | S | Q | L | F | K | G | H | P | D | L | I |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|