|   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | R | N | V | P | I | W | A | Q | K | W | K | P | T | I | K | A | L | Q | S | I | N | V | K | D | L | K | I | D | P | S | F | L | N | I | I | P | D | D | D | L | T | K | S | V | Q | D | W | V | Y | A | T | I | Y | S | I | A | P | E | L | R | S | F | I | E | L | E | M | K | F | G | V | I | I | D | A | K | G | P | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |   |
Template Sequence |   |
Y | R | N | V | P | I | W | A | Q | K | W | K | P | T | I | K | A | L | Q | S | I | N | V | K | D | L | K | I | D | P | S | F | L | N | I | I | P | D | D | D | L | T | K | S | V | Q | D | W | V | Y | A | T | I | Y | S | I | A | P | E | L | R | S | F | I | E | L | E | M | K | F | G | V | I | I | D | A | K | G | P | D |
Template Known Secondary structure |   |
S |
|
|
|
| G | G | G |
|
|
|
|
|
|
|
|
|  |  |
|
| S | S | S |
|
| S | S |
| S | S | T | T | S |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
  |
  |   |
321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | N | P | P | V | S | S | Q | C | V | F | T | E | L | D | A | H | L | T | P | N | I | D | A | S | L | F | K | E | L | S | K | Y | I | R | G | I | S | E | V | T | E | N | T | G | K | F | S | I | I | E | S | Q | T | R | D | S | V | Y | R | V | G | L | S | T | Q | R | P | R | F | L | R | M | S | T | D | I | K | T |
Query Conservation |   |
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|   |
|   |   |
|
Template Sequence |   |
R | V | N | P | P | V | S | S | Q | C | V | F | T | E | L | D | A | H | L | T | P | N | I | D | A | S | L | F | K | E | L | S | K | Y | I | R | G | I | S | E | V | T | E | N | T | G | K | F | S | I | I | E | S | Q | T | R | D | S | V | Y | R | V | G | . |
. |
. |
. |
. |
P | R | F | L | R | M | S | T | D | I | K | T |
Template Known Secondary structure |   |
B |
|
|
| S |
|
| S |
|  |  |  |
|
| T | T |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | G | G | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  | S | S | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 390 | . | . | . | . | . |
  |
  |   |
401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | V | G | Q | F | I | E | K | R | H | V | A | Q | L | L | L | Y | S | P | K | D | S | Y | D | V | K | I | S | L | N | L | E | L | P | V | P | D | N | D | P | P | E | K | Y | K | S | Q | S | P | I | S | E | R | T | K | D | R | V | S | Y | I | H | N | D | S | C | T | R | I | D | I | T | K | V | E | N | H | N | Q |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|   |   | . | . | . |
Template Sequence |   |
G | R | V | G | Q | F | I | E | K | R | H | V | A | Q | L | L | L | Y | S | P | K | D | S | Y | D | V | K | I | S | L | N | L | E | L | P | V | P | D | N | D | P | P | E | K | Y | K | S | Q | S | P | I | S | E | R | T | K | D | R | V | S | Y | I | H | N | D | S | C | T | R | I | D | I | T | K | V | E | N | . |
. |
. |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |  |  | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | |
|
|
  |
  |   |
481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | K | S | R | Q | S | E | T | T | H | E | V | E | L | E | I | N | T | P | A | L | L | N | A | F | D | N | I | T | N | D | S | K | E | Y | A | S | L | I | R | T | F | L | N | N | G | T | I | I | R | R | K | L | S | S | L | S | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
H | S | E | T | T | H | E | V | E | L | E | I | N | T | P | A | L | L | N | A | F | D | N | I | T | N | D | S | K | E | Y | A | S | L | I | R | T | F | L | N | N | G | T | I | I | R | R | K | L | S | S | L | S | Y |
Template Known Secondary structure |   |
. | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . |
  |