 |
| Job Description | D6VPM8 | | Confidence | 3.32% | Date | Mon Jul 2 19:10:02 BST 2012 |
| Rank | 90 | Aligned Residues | 52 |
| % Identity | 8% | Template | d2okqa1 |
| SCOP info | Ferredoxin-like
| Dimeric alpha+beta barrel
| YbaA-like
|
| Resolution | 1.80 |
|
|   |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | S | I | A | G | K | E | W | K | T | I | T | Y | N | M | N | Q | Y | L | F | K | A | G | L | W | K | T | P | Y | H | F | F | C | E | . |
. |
H | Q | C | Y | E | F | F | K | D | L | I | K | G | K | Y | P | D | V |
| Query Conservation |   |
|
|   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
| . | . |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |
|   |
|
|
|
|   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|
|
| Template Sequence |   |
P | A | D | K | K | D | A | Y | R | E | M | A | A | K | A | A | P | L | F | K | E | F | G | A | L | R | I | V | E | C | W | A | S | D | V | P | D | G | K | V | T | D | F | R | M | A | V | K | A | E | E | N | E | E |
| Template Known Secondary structure |   |
 | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| S | S |
|
|
|
| S | S |
|
|  |  |  |  | T | T |
|
| T | T |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|