Job Description D6VPM8 Confidence 4.50% Date Mon Jul 2 19:10:02 BST 2012 Rank 69 Aligned Residues 50 % Identity 12% Template d1igna1 SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like DNA-binding domain of rap1 Resolution 2.25

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		58	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		K	L	L	L	E	V	I	T	H	R	P	S	I	.	.	A	G	K	E	W	K	T	I	T	Y	N	M	N	Q	Y	L	F	K	A	G	L	W	K	T	P	Y	H	F	F	C	E	H	Q	C	Y	E	F	F	K	D	L	I	K	G	K	Y	P	D	V	Q	W
Query Conservation															.	.
Alig confidence															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	I	L	D	V	V	R	K	N	P	T	R	R	T	T	H	T	L	Y	D	E	I	S	H	Y	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	G	N	S	I	R	H	R	F	R	V	Y	L	S	K	R	L	E	Y	V	Y	E
Template Known Secondary structure										T	S	G	G	G	T	T		S							T	T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	T	G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.															.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions