 |
| Job Description | D6VPM8 | | Confidence | 7.06% | Date | Mon Jul 2 19:10:02 BST 2012 |
| Rank | 40 | Aligned Residues | 37 |
| % Identity | 24% | Template | d1h8ac1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Myb/SANT domain
|
| Resolution | 2.23 |
|
|   |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | L | L | L | E | V | I | T | H | R | P | S | I | A | G | K | E | W | K | T | I | T | Y | N | M | N | Q | Y | L | F | K | A | G | L | W | K | T | P | Y | H | F | F | C | E | H | Q | C | Y | E | F | F | K | D | L | I |
| Query Conservation |   |
|
|
|   |
|
|
|   |   |   |
|
|   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   | . | . | . | . |   |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|
|   |
|
|   |   |   |
|
| Template Sequence |   |
R | V | I | E | H | V | Q | K | Y | G | P | K | . |
. |
. |
. |
R | W | S | D | I | A | K | H | L | K | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | G | K | Q | C | R | E | R | W | H | N | H | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S |
| . | . | . | . |
|  |  |  |  |  |  |  | S | S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|