 |
| Job Description | D6VPM8 | | Confidence | 4.83% | Date | Mon Jul 2 19:10:02 BST 2012 |
| Rank | 64 | Aligned Residues | 40 |
| % Identity | 15% | Template | d1guua_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Myb/SANT domain
|
| Resolution | 1.6 |
|
|   |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | L | L | L | E | V | I | T | H | R | P | S | I | A | G | K | E | W | K | T | I | T | Y | N | M | N | Q | Y | L | F | K | A | G | L | W | K | T | P | Y | H | F | F | C | E | H | Q | C | Y | E | F | F | K | D | L | I | K | G | K |
| Query Conservation |   |
|
|
|   |
|
|
|   |   |   |
|
|   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|
|   |
|
|   |   |   |
| . |   |
|
| Template Sequence |   |
E | K | L | K | K | L | V | E | Q | N | G | T | D | D | . |
. |
. |
W | K | V | I | A | N | Y | L | P | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | T | D | V | Q | C | Q | H | R | W | Q | K | V | L | . |
N | P |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| S | S |
| . | . | . |  |  |  |  |  |  | T | S | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | S |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
. | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|