Return to main results Retrieve Phyre Job Id

Job DescriptionD6VPM8
Confidence20.43%DateMon Jul 2 19:10:02 BST 2012
Rank8Aligned Residues25
% Identity8%Templatec4eefI_
PDB info PDB header:immune system/inhibitorChain: I: PDB Molecule:f-hb80.4, designed hemagglutinin binding protein; PDBTitle: crystal structure of the designed inhibitor protein f-hb80.4 in2 complex with the 1918 influenza virus hemagglutinin.
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80..
Predicted Secondary structure 





Query SS confidence 
























Query Sequence  KLLLEVITHRPSIAGKEWKTITYNM
Query Conservation 


 


   

 
 
 

 

  
Alig confidence 
























Template Conservation    
  

          
  

  
Template Sequence  IAFEIALSFTNKDTPDRWKKVAQYV
Template Known Secondary structure 

SS
TTTTS
Template Predicted Secondary structure 





Template SS confidence 
























   17..20.........30.........40.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions