Job Description O14464 Confidence 6.47% Date Mon Jul 2 19:10:21 BST 2012 Rank 15 Aligned Residues 31 % Identity 29% Template c3hsbB_ PDB info PDB header:rna binding protein/rna Chain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer Resolution 2.20 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	G	F	K	V	R	T	S	V	K	K	F	C	S	D	C	Y	L	V	R	R	K	G	R	V	Y	I	Y	C	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	G	F	Q	L	R	G	Q	V	K	G	F	D	N	F	T	V	L	L	E	S	E	G	K	Q	Q	L	I	Y	K
Template Known Secondary structure		T	T	S												S	S							T	T							G
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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