Job Description O13527 Confidence 12.73% Date Mon Jul 2 19:10:08 BST 2012 Rank 89 Aligned Residues 121 % Identity 14% Template c3f2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.														.
Query SS confidence																						.	.	.	.	.	.	.														.
Query Sequence		N	S	Y	E	P	F	Q	Y	L	H	T	D	I	F	G	P	V	H	N	L	.	.	.	.	.	.	.	P	K	S	A	P	S	Y	F	I	S	F	T	D	.	E	T	T	K	L	R	W	V	Y	P	L	H	D	R	R	E	D	S	I	L	D	V	F	T	T	I	L	A	F	I	K	N	Q	F	Q	A	S	V	L
Query Conservation																						.	.	.	.	.	.	.														.
Alig confidence																.						.	.	.	.	.	.	.						.	.	.						.									.	.	.	.	.	.	.	.	.	.
Template Conservation																.																		.	.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	P	S	P	V	V	F	C	H	N	D	C	Q	.	E	G	N	I	L	L	L	E	G	R	E	N	S	E	K	Q	K	.	.	.	L	M	L	I	D	F	E	Y	S	S	Y	N	Y	R	.	.	.	.	.	.	.	.	.	.	G	F	D	I	G	N	H	F	C	E	W	M	Y	D	Y	S	Y	E	K	Y	P
Template Known Secondary structure		T	S									S			S	.	G	G	G					T	T	G	G	G		S	S		S	.	.	.							T	T							.	.	.	.	.	.	.	.	.	.											T	T			T	T		S	S	T	T
Template Predicted Secondary structure																.																		.	.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.											340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	Q	M	D	R	G	S	E	Y	T	N	R	T	L	H	K	F	L	E	K	N	G	I	T	P	C	Y	T	T	T	A	D	S	R	A	H	G	V	A	E	R	L	N	R	T	L	L	D	D	C	R	T	Q	L	Q	C	S	G	L	P	N	H	L	W	F
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		F	F	R	A	N	I	R	K	Y	P	T	K	K	Q	Q	L	H	F	I	S	S	Y	.	.	.	L	P	A	F	Q	D	F	E	N	L	S	T	E	E	K	S	I	I	K	E	E	M	L	L	E	V	N	R	F	A	L	A	S	H	F	L	W	G	L	W	S
Template Known Secondary structure		S					G	G	G	S														.	.	.							G	G	G	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.				.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions