Job Description O13527 Confidence 90.07% Date Mon Jul 2 19:10:08 BST 2012 Rank 47 Aligned Residues 92 % Identity 24% Template c2rpiA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease h; PDBTitle: the nmr structure of the submillisecond folding2 intermediate of the thermus thermophilus ribonuclease h Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	K	L	V	A	I	S	D	A	S	Y	G	N	Q	P	Y	Y	K	S	Q	I	G	N	I	Y	L	L	N	G	K	V	I	G	G	K	S	T	K	A	S	L	T	C	T	S	T	T	E	A	E	I	H	A	I	S	E	S	V	P	L	L	N	N	L	S	Y	L	I	Q	E	L	N	K	K	P	I	I	K
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	K	R	V	A	L	F	T	D	G	A	A	L	G	N	P	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	N	N	R	M	E	L	K	A	A	I	E	G	L	K	A	L	.	.	.	.	.	.	.	.	.	.	.	K	E	P	A	E	V
Template Known Secondary structure		S	S			B			B								S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																T	T	.	.	.	.	.	.	.	.	.	.	.						B
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.									.	.	.	1140	.	.	.	.	.	.	.	.	.	1150			.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.															.	.
Query SS confidence																	.	.	.	.	.	.	.	.															.	.
Query Sequence		G	L	L	T	D	S	R	S	T	I	S	I	I	K	S	.	.	.	.	.	.	.	.	T	N	E	E	K	F	R	N	R	F	F	G	T	K	.	.	A	M	R	L	R	D	E	V	S	G	N	N	L	Y	V	Y	Y	I	E
Query Conservation																	.	.	.	.	.	.	.	.															.	.
Alig confidence																	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		D	L	Y	T	D	S	H	Y	L	K	K	A	F	T	E	G	W	L	E	G	W	R	K	R	G	W	R	T	A	E	G	K	P	V	K	N	R	D	L	W	E	A	L	L	L	A	M	A	P	H	R	V	R	F	H	F	V	K
Template Known Secondary structure								T	T							T		T							T	T	S	B		S	S	S	S	B		T	T											T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions