Job Description O13527 Confidence 97.78% Date Mon Jul 2 19:10:08 BST 2012 Rank 30 Aligned Residues 129 % Identity 15% Template c2qkkI_ PDB info PDB header:hydrolase/dna/rna Chain: I: PDB Molecule:ribonuclease h1; PDBTitle: human rnase h catalytic domain mutant d210n in complex with2 14-mer rna/dna hybrid Resolution 3.20 Å

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		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	K	L	V	A	I	S	D	A	S	Y	G	N	Q	P	Y	Y	K	S	Q	I	G	N	I	Y	L	L	N	G	K	V	I	G	G	K	S	T	K	A	S	L	T	C	T	S	T	T	E	A	E	I	H	A	I	S	E	S	V	P	L	L	N	N	L	S	Y	L	I	Q	E	L	N	K	K	P	I	I	K
Query Conservation
Alig confidence																																																	.																.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																.	.	.	.	.	.	.	.	.
Template Sequence		M	G	D	F	V	V	V	Y	T	D	G	C	C	S	S	N	G	R	R	R	P	R	A	G	I	G	V	Y	W	G	P	G	H	P	L	N	V	G	I	R	L	P	G	R	Q	T	N	.	Q	R	A	E	I	H	A	A	C	K	A	I	E	Q	A	.	.	.	.	.	.	.	.	.	K	T	Q	N	I	N	K	L
Template Known Secondary structure				S	S											T	S	S	S	S	S										S	T	T		T	T		B						S	S				.																.	.	.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																																	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.
		1122	.	.	.	.	.	.	.	1130	.	.	.	.										.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.						.	.	.	.	.	.	.	1180
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Query Sequence		G	L	L	T	D	S	R	S	T	I	S	I	I	.	.	.	.	.	.	.	.	.	K	S	T	N	E	E	K	F	R	N	R	F	F	G	T	K	A	M	R	L	R	D	E	V	S	G	N	N	L	Y	V	Y	Y	I	E	T	K	K	.	.	.	.	.	N	I	A	D	V	M	T	K
Query Conservation															.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation
Template Sequence		V	L	Y	T	N	S	M	F	T	I	N	G	I	T	N	W	V	Q	G	W	K	K	N	G	W	K	T	S	A	G	K	E	V	I	N	K	E	D	F	V	A	L	E	R	L	T	Q	G	M	D	I	Q	W	M	H	V	P	G	H	S	G	F	I	G	N	E	E	A	D	R	L	A	R
Template Known Secondary structure															T	T									T	S	B		T	T	S	S	B		S											T	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions