Emaill.a.kelley@imperial.ac.uk
DescriptionO13563
DateMon Jul 2 19:10:15 BST 2012
Unique Job IDd56708941e75af94

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2kr0A_



100.0 24 PDB header:protein binding
Chain: A: PDB Molecule:proteasomal ubiquitin receptor adrm1;
PDBTitle: a proteasome protein
2c2z59A_



100.0 29 PDB header:protein transport
Chain: A: PDB Molecule:protein adrm1;
PDBTitle: complex structures of mouse rpn13 (22-130aa) and ubiquitin
3c2r2yA_



100.0 29 PDB header:protein binding
Chain: A: PDB Molecule:protein adrm1;
PDBTitle: crystal structure of the proteasomal rpn13 pru-domain
4c2z4dA_



100.0 100 PDB header:nuclear protein
Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn13;
PDBTitle: nmr structures of yeast proteasome component rpn13
5d2aj7a1



81.0 18 Fold:BH3618-like
Superfamily:BH3618-like
Family:BH3618-like
6d1ddwa_



51.3 15 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
7d1evha_



50.3 13 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
8c2l23A_



35.3 20 PDB header:transcription
Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25;
PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein
9c2kc8B_



29.4 32 PDB header:toxin/toxin repressor
Chain: B: PDB Molecule:antitoxin relb;
PDBTitle: structure of e. coli toxin rele (r81a/r83a) mutant in2 complex with antitoxin relbc (k47-l79) peptide
10d2hx0a1



22.0 19 Fold:AF0104/ALDC/Ptd012-like
Superfamily:AF0104/ALDC/Ptd012-like
Family:AF0104-like
11c3fkeB_



19.7 16 PDB header:rna binding protein
Chain: B: PDB Molecule:polymerase cofactor vp35;
PDBTitle: structure of the ebola vp35 interferon inhibitory domain
12d2h6la1



19.1 16 Fold:AF0104/ALDC/Ptd012-like
Superfamily:AF0104/ALDC/Ptd012-like
Family:AF0104-like
13d2ns0a1



18.8 23 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:RHA1 ro06458-like
14d1qqga2



18.0 33 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Phosphotyrosine-binding domain (PTB)
15d1egxa_



17.3 19 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
16c1bcrA_



14.9 31 PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:serine carboxypeptidase ii;
PDBTitle: complex of the wheat serine carboxypeptidase, cpdw-ii, with the2 microbial peptide aldehyde inhibitor, antipain, and arginine at room3 temperature
17c2dt4A_



14.3 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph0802;
PDBTitle: crystal structure of pyrococcus horikoshii a plant- and prokaryote-2 conserved (ppc) protein at 1.60 resolution
18c3isyA_



13.5 14 PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
19c3apaA_



13.5 18 PDB header:sugar binding protein
Chain: A: PDB Molecule:zymogen granule membrane protein 16;
PDBTitle: crystal structure of human pancreatic secretory protein zg16p
20d1olma2



12.3 23 Fold:Supernatant protein factor (SPF), C-terminal domain
Superfamily:Supernatant protein factor (SPF), C-terminal domain
Family:Supernatant protein factor (SPF), C-terminal domain
21c3egbA_



not modelled 12.1 18 PDB header:protein binding
Chain: A: PDB Molecule:protein pellino homolog 2;
PDBTitle: structure of pellino2 fha domain at 3.3 angstroms resolution.
22c1z8rA_



not modelled 11.9 16 PDB header:hydrolase
Chain: A: PDB Molecule:coxsackievirus b4 polyprotein;
PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51)
23c3hwuA_



not modelled 11.5 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of putative dna-binding protein (yp_299413.1) from2 ralstonia eutropha jmp134 at 1.30 a resolution
24d2hrva_



not modelled 10.8 8 Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
25c1qqgA_



not modelled 9.3 33 PDB header:signal transduction
Chain: A: PDB Molecule:insulin receptor substrate 1;
PDBTitle: crystal structure of the ph-ptb targeting region of irs-1
26c1gxsC_



not modelled 9.0 20 PDB header:lyase
Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a;
PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme
27d1xoub_



not modelled 8.6 35 Fold:EspA/CesA-like
Superfamily:EspA/CesA-like
Family:EspA chaperone CesA
28d1zaka2



not modelled 8.6 40 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
29d1i2ha_



not modelled 8.5 11 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
30d2a6sa1



not modelled 7.7 19 Fold:RelE-like
Superfamily:RelE-like
Family:YoeB/Txe-like
31d1xr0b_



not modelled 7.2 20 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Phosphotyrosine-binding domain (PTB)
32d2gdta1



not modelled 7.2 24 Fold:SARS Nsp1-like
Superfamily:SARS Nsp1-like
Family:SARS Nsp1-like
33d1usma_



not modelled 7.1 24 Fold:DCoH-like
Superfamily:PCD-like
Family:PCD-like
34c1jmuD_



not modelled 7.0 19 PDB header:viral protein
Chain: D: PDB Molecule:protein mu-1;
PDBTitle: crystal structure of the reovirus mu1/sigma3 complex
35c3htnA_



not modelled 6.9 14 PDB header:metal binding protein
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: crystal structure of a putative dna binding protein (bt_1116) from2 bacteroides thetaiotaomicron vpi-5482 at 1.50 a resolution
36d1r9wa_



not modelled 6.7 11 Fold:Origin of replication-binding domain, RBD-like
Superfamily:Origin of replication-binding domain, RBD-like
Family:Replication initiation protein E1
37d1oqka_



not modelled 6.6 13 Fold:Rof/RNase P subunit-like
Superfamily:Rof/RNase P subunit-like
Family:RNase P subunit p29-like
38d1gpca_



not modelled 6.5 23 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Phage ssDNA-binding proteins
39d1bqua2



not modelled 6.4 13 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
40c3oeiH_



not modelled 6.4 10 PDB header:toxin, protein binding
Chain: H: PDB Molecule:relk (toxin rv3358);
PDBTitle: crystal structure of mycobacterium tuberculosis reljk (rv3357-rv3358-2 relbe3)
41c2odxA_



not modelled 6.2 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c oxidase polypeptide iv;
PDBTitle: solution structure of zn(ii)cox4
42d3bwuc1



not modelled 6.2 18 Fold:Immunoglobulin-like beta-sandwich
Superfamily:PapD-like
Family:Pilus chaperone
43c3ewgA_



not modelled 6.1 8 PDB header:transcription
Chain: A: PDB Molecule:putative transcription antitermination protein nusg;
PDBTitle: crystal structure of the n-terminal domain of nusg (ngn) from2 methanocaldococcus jannaschii
44c2zkro_



not modelled 6.0 15 PDB header:ribosomal protein/rna
Chain: O: PDB Molecule:rna expansion segment es30;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
45d2hg6a1



not modelled 6.0 33 Fold:PA1123-like
Superfamily:PA1123-like
Family:PA1123-like
46d1jl1a_



not modelled 5.9 14 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Ribonuclease H
47c3pjyB_



not modelled 5.9 8 PDB header:transcription regulator
Chain: B: PDB Molecule:hypothetical signal peptide protein;
PDBTitle: crystal structure of a putative transcription regulator (r01717) from2 sinorhizobium meliloti 1021 at 1.55 a resolution
48c2ktrA_



not modelled 5.7 18 PDB header:signaling protein, transport protein
Chain: A: PDB Molecule:sequestosome-1;
PDBTitle: nmr structure of p62 pb1 dimer determined based on pcs
49c2cseB_



not modelled 5.4 19 PDB header:virus
Chain: B: PDB Molecule:major outer-capsid protein mu1;
PDBTitle: features of reovirus outer-capsid protein mu1 revealed by2 electron and image reconstruction of the virion at 7.0-a3 resolution
50d1eeta1



not modelled 5.4 24 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Ribonuclease H
51c2lhkB_



not modelled 5.3 30 PDB header:chaperone
Chain: B: PDB Molecule:l0052;
PDBTitle: structural analysis of a chaperone in type iii secretion system
52d1mu2a1



not modelled 5.3 24 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Ribonuclease H
53c3ddcB_



not modelled 5.2 18 PDB header:hydrolase/apoptosis
Chain: B: PDB Molecule:ras association domain-containing family protein 5;
PDBTitle: crystal structure of nore1a in complex with ras
54c3u22B_



not modelled 5.2 6 PDB header:heme binding protein
Chain: B: PDB Molecule:putative hmuy_like heme binding protein;
PDBTitle: crystal structure of a putative hmuy_like heme binding protein2 (bvu_2192) from bacteroides vulgatus atcc 8482 at 2.12 a resolution
55d1qc6a_



not modelled 5.2 18 Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
56d1f08a_



not modelled 5.2 22 Fold:Origin of replication-binding domain, RBD-like
Superfamily:Origin of replication-binding domain, RBD-like
Family:Replication initiation protein E1
57c3ks8D_



not modelled 5.2 12 PDB header:viral protein/rna
Chain: D: PDB Molecule:polymerase cofactor vp35;
PDBTitle: crystal structure of reston ebolavirus vp35 rna binding2 domain in complex with 18bp dsrna
58c3iz5D_



not modelled 5.1 15 PDB header:ribosome
Chain: D: PDB Molecule:60s ribosomal protein l4 (l4p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
59c3dwvB_



not modelled 5.1 18 PDB header:oxidoreductase
Chain: B: PDB Molecule:glutathione peroxidase-like protein;
PDBTitle: glutathione peroxidase-type tryparedoxin peroxidase,2 oxidized form
60d1fltx_



not modelled 5.1 19 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
61d2r4qa1



not modelled 5.1 13 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Fructose specific IIB subunit-like
62c3q6kA_



not modelled 5.0 12 PDB header:protein binding
Chain: A: PDB Molecule:43.2 kda salivary protein;
PDBTitle: salivary protein from lutzomyia longipalpis