Return to main results Retrieve Phyre Job Id

Job DescriptionO13563
Confidence3.52%DateMon Jul 2 19:10:15 BST 2012
Rank97Aligned Residues34
% Identity12%Templated2df7a1
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Birnaviridae-like VP
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.....
Predicted Secondary structure 














Query SS confidence 

































Query Sequence  RLCTPIPVQGEIEIKPNEEEELGFWDFEWRPTEK
Query Conservation    
 

 


 
 
    
 
  
  
 
  
  
Alig confidence 

































Template Conservation 

    






 


 
 






   
 
 
Template Sequence  NLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGN
Template Known Secondary structure 

TTS

TT
SSS
TTS
Template Predicted Secondary structure 















Template SS confidence 

































   46...50.........60.........70.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions