|   |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
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| Predicted Secondary structure |   |
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| . | . |
| Query SS confidence |   |
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| . |
. |
| Query Sequence |   |
S | T | V | I | K | F | R | A | G | V | C | E | Y | N | E | D | S | R | L | . |
C | T | P | I | P | V | Q | G | E | I | E | I | K | P | N | E | E | E | E | L | G | F | W | D | F | E | W | R | P | T | E | K | P | V | G | R | E | L | D | P | I | S | L | I | L | I | P | G | E | T | M | W | V | P | I | K | S | S | . |
. |
| Query Conservation |   |
  |   |
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|   |   |   |   |   |   |
|   |   | . |
|   |
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|   |   |   |   |   |   |   |   |   |
|   |
|   |
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|   |
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|   |   |
| . | . |
| Alig confidence |   |
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| . | . |
| Template Conservation |   |
  |   |
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|   |   |   |
|   |
| . |   |
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|   |   | . | . | . | . | . | . |
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|   |   |   | . |
|   |
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| Template Sequence |   |
Q | P | I | F | S | T | R | A | H | V | F | Q | I | D | P | N | T | K | K | N | W | V | P | . |
T | S | K | H | A | V | T | V | S | Y | F | Y | D | S | T | R | N | V | Y | R | I | I | S | L | D | G | S | K | . |
. |
. |
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. |
A | I | I | N | S | T | I | T | P | N | . |
X | T | F | T | K | T | S | Q | K | F | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T | S |
| S |  |  |  | . | S |
| S | S |
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T | T |  | . | . | . | . | . | . |  |  |  |  |  |  |
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| T | T | . |
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|  |  |
| S | S | S |  |  |
| Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . |
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|  | . | . | . | . | . | . |  |  |  |  |  |  |  |
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| . |
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| Template SS confidence |   |
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|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
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. | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . |
|   |
|   |   |
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82 | . | . | . | . | . | . | . | 90 | . | . | . |
| Predicted Secondary structure |   |
. | . | . | . | . |
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|  |  |  |  |  |  |  |
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| Query SS confidence |   |
. |
. |
. |
. |
. |
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| Query Sequence |   |
. |
. |
. |
. |
. |
K | S | G | R | I | F | A | L | V | F | S | S |
| Query Conservation |   |
. | . | . | . | . |   |
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|   |
|
| Alig confidence |   |
. | . | . | . | . |
|
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| Template Conservation |   |
|
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|   |
|   |   |   |
|   |
|
|   |
|   |
|
| Template Sequence |   |
Q | W | A | D | S | R | A | N | T | V | Y | G | L | G | F | S | S |
| Template Known Secondary structure |   |
 |  |  |  | T | T | T | T |  |  |  |  |  |  |
| S | S |
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
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| Template SS confidence |   |
|
|
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|   |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
|   |