Job Description O13563 Confidence 5.10% Date Mon Jul 2 19:10:15 BST 2012 Rank 58 Aligned Residues 66 % Identity 15% Template c3iz5D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:60s ribosomal protein l4 (l4p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	R	A	G	V	C	E	Y	N	E	D	S	R	L	C	T	P	I	P	V	Q	G	E	I	E	I	K	P	N	E	E	E	E	L	G	F	W	D	F	E	W	R	P	T	E	K	P	V	G	R	E	L	D	P	I	S	L	I	L	I	P	G	E	T	M	W	V	P	I	K	S	S	K	S	G	R	I	F	A
Query Conservation
Alig confidence															.	.	.	.																	.	.				.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																	.	.				.	.	.	.	.	.	.	.	.
Template Sequence		G	I	R	P	G	K	G	K	M	R	N	R	R	.	.	.	.	Y	I	N	R	K	G	P	L	I	V	Y	G	T	E	G	S	.	.	K	I	V	.	.	.	.	.	.	.	.	.	K	A	F	R	N	L	P	G	V	D	V	A	N	V	E	R	L	N	L	L	D	L	A	P	G	G	H	L	G	R	F	V	I
Template Known Secondary structure						S	G	G	G	G	T	T		S	.	.	.	.														T	T	T	.	.				.	.	.	.	.	.	.	.	.					T	S	T	T						G	G	G							S	G	G	G
Template Predicted Secondary structure															.	.	.	.																	.	.				.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.										.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		89
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		257

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions