 |
| Job Description | O13563 | | Confidence | 4.03% | Date | Mon Jul 2 19:10:15 BST 2012 |
| Rank | 76 | Aligned Residues | 85 |
| % Identity | 20% | Template | c3dkqB_ |
| PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:pkhd-type hydroxylase sbal_3634; |
PDBTitle: crystal structure of putative oxygenase (yp_001051978.1) from2 shewanella baltica os155 at 2.26 a resolution
|
| Resolution | 2.26 Å |
|
 |
|   |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | I | E | I | K | P | N | E | E | E | E | L | G | F | W | D | F | E | W | R | P | T | E | K | P | V | G | R | E | L | D | P | I | S | L | I | L | I | P | G | E | T | M | W | V | P | I | K | S | S | K | S | G | R | I | F | A | L | V | F | S | S | N | E | R | Y | F | F | W | L | Q | E | K | N | S | G | N | L | P | L |
| Query Conservation |   |
  |
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
| . | . |   |   |
|   |   |
|   |
|   |
|   |   | . |   |
|   |
|   |
|
|
|   |
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |
|   |   |   |   |   |
|
| Template Sequence |   |
T | L | F | L | S | E | P | E | N | Y | Q | G | G | E | L | V | I | Q | D | T | Y | G | Q | Q | S | I | K | L | . |
. |
S | A | G | S | L | V | L | Y | P | S | S | S | . |
L | H | Q | V | T | P | V | L | S | G | E | R | T | A | A | . |
. |
. |
. |
. |
. |
. |
. |
F | X | W | L | Q | S | X | V | R | D | E | G | Q | R |
| Template Known Secondary structure |   |
 |  |  |
| S |
| G | G | G |  |  |  |
|
|  |  |  |  |
| S | S |
|  |  |  |  |
|
| . | . |
| T | T |
|  |  |  |  |  | T | T | S | . |
|  |  |  |
|
|  |  |  |  |
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  | S | S |
|
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
. | . | . | . | . | . | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
|   |
|   |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | E | L | S | A | K | D | K | E | I | Y | N | K | M | I | G |
| Query Conservation |   |
  |   |
|
|   |
|
|   |   |
|   |   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
| Template Sequence |   |
R | L | L | F | Q | L | D | Q | S | I | Q | S | L | T | A | Q |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|