Job Description O13563 Confidence 100.00% Date Mon Jul 2 19:10:15 BST 2012 Rank 2 Aligned Residues 108 % Identity 29% Template c2z59A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein adrm1; PDBTitle: complex structures of mouse rpn13 (22-130aa) and ubiquitin Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	K	F	R	A	G	V	C	E	Y	N	E	D	S	R	L	C	T	P	I	P	V	Q	G	E	I	E	I	K	P	N	E	E	E	E	L	G	F	W	D	F	E	W	R	P	T	E	K	P	V	G	R	E	L	D	P	I	S	L	I	L	I	P	G	E	T	M	W	V	P	I	K	S	S	K	S	G	R
Query Conservation
Alig confidence																		.	.																			.	.	.													.	.	.	.
Template Conservation																		.	.																			.	.	.													.	.	.	.
Template Sequence		Y	L	V	E	F	R	A	G	K	M	S	L	K	G	T	T	.	.	V	T	P	D	K	R	K	G	L	V	Y	I	Q	Q	T	D	D	S	.	.	.	L	I	H	F	C	W	K	D	R	T	S	G	.	.	.	.	T	V	E	D	D	L	I	I	F	P	D	D	C	E	F	K	R	V	P	Q	C	P	S	G	R
Template Known Secondary structure															T	T		.	.						S										T	T	S	.	.	.									T	T	T		.	.	.	.										T	T	T							S	S		S	S
Template Predicted Secondary structure																		.	.																			.	.	.													.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		86	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		I	F	A	L	V	F	.	S	S	N	E	R	Y	F	F	W	L	Q	E	K	N	S	G	N	L	P	L	N	E	L	S	A	K	D	K	E	I	Y	N	K	M	I	G	V	L	N	N
Query Conservation								.
Alig confidence								.																.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	V	L	K	F	K	A	G	S	K	R	L	F	F	W	M	Q	E	P	K	T	.	.	.	.	.	.	.	.	.	D	Q	D	E	E	H	C	R	K	V	N	E	C	L	N	N
Template Known Secondary structure								S	S	T	T										S		G	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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