Job Description O13563 Confidence 100.00% Date Mon Jul 2 19:10:15 BST 2012 Rank 4 Aligned Residues 96 % Identity 100% Template c2z4dA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn13; PDBTitle: nmr structures of yeast proteasome component rpn13 Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	K	F	R	A	G	V	C	E	Y	N	E	D	S	R	L	C	T	P	I	P	V	Q	G	E	I	E	I	K	P	N	E	E	E	E	L	G	F	W	D	F	E	W	R	P	T	E	K	P	V	G	R	E	L	D	P	I	S	L	I	L	I	P	G	E	T	M	W	V	P	I	K	S	S	K	S	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	I	K	F	R	A	G	V	C	E	Y	N	E	D	S	R	L	C	T	P	I	P	V	Q	G	E	I	E	I	K	P	N	E	E	E	E	L	G	F	W	D	F	E	W	R	P	T	E	K	P	V	G	R	E	L	D	P	I	S	L	I	L	I	P	G	E	T	M	W	V	P	I	K	S	S	K	S	G	R
Template Known Secondary structure															T	T	T	T						S				B						T	T	T	S	S	S								B	S		S			S	S												T	T	T	S				S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	A	L	V	F	S	S	N	E	R	Y	F	F	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	A	L	V	F	S	S	N	E	R	Y	F	F	W	L
Template Known Secondary structure								S	S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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