Job Description O13563 Confidence 35.31% Date Mon Jul 2 19:10:15 BST 2012 Rank 8 Aligned Residues 50 % Identity 20% Template c2l23A_ PDB info PDB header:transcription Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25; PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein Resolution UNK

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	E	T	M	W	V	P	I	K	S	S	K	S	G	R	I	F	A	L	V	F	S	S	N	E	R	Y	F	F	W	L	Q	E	K	N	S	G	N	L	P	L	N	E	L	S	A	K	D	K	E	I	Y	N	K	M	I	G	V	L	N	N
Query Conservation
Alig confidence															.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	G	C	V	H	F	P	H	T	A	P	C	.	E	V	R	V	L	M	L	L	Y	S	S	K	K	K	I	F	M	G	L	I	P	Y	D	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.	F	V	N	G	I	R	Q	V	I	T	N
Template Known Secondary structure										S	S	S			.											T	T	T	T								S					.	.	.	.	.	.	.	.	.	.	.	.								T	T	G	G
Template Predicted Secondary structure															.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.													.	.	.	.	.	.	150	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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