Job Description O13563 Confidence 100.00% Date Mon Jul 2 19:10:15 BST 2012 Rank 1 Aligned Residues 137 % Identity 24% Template c2kr0A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:proteasomal ubiquitin receptor adrm1; PDBTitle: a proteasome protein Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	S	S	T	V	I	K	F	R	A	G	V	C	E	Y	N	E	D	S	R	L	C	T	P	I	P	V	Q	G	E	I	E	I	K	P	N	E	E	E	E	L	G	F	W	D	F	E	W	R	P	T	E	K	P	V	G	R	E	L	D	P	I	S	L	I	L	I	P	G	E	T	M	W	V	P	I	K	S	S
Query Conservation
Alig confidence																						.	.																			.	.	.													.	.	.	.
Template Conservation																						.	.																			.	.	.													.	.	.	.
Template Sequence		A	S	N	K	Y	L	V	E	F	R	A	G	K	M	S	L	K	G	T	T	.	.	V	T	P	D	K	R	K	G	L	V	Y	I	Q	Q	T	D	D	S	.	.	.	L	I	H	F	C	W	K	D	R	T	S	G	.	.	.	.	N	V	E	D	D	L	I	I	F	P	D	D	C	E	F	K	R	V	P	Q	C
Template Known Secondary structure		S			S		S											S	S	S	S	.	.						S										T	T	S	.	.	.									S	S	S		.	.	.	.										T	T	S							T	T
Template Predicted Secondary structure																						.	.																			.	.	.													.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																	.	.	.
Predicted Secondary structure												.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	G	R	I	F	A	L	V	F	.	S	S	N	E	R	Y	F	F	W	L	Q	E	K	N	S	G	N	L	P	L	N	E	L	S	A	K	D	K	E	I	Y	N	K	M	I	G	V	L	N	N	S	S	E	S	D	E	E	E	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	K
Query Conservation												.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		P	S	G	R	V	Y	V	L	K	F	K	A	G	S	K	R	L	F	F	W	M	Q	E	P	K	T	.	.	.	.	.	.	.	.	.	D	Q	D	E	E	H	C	R	K	V	N	E	Y	L	N	N	P	P	M	P	G	A	L	G	A	S	G	S	S	G	H	E	L	S	A	L	G	G	E	G	G	L	Q	S	L
Template Known Secondary structure		S	S	S								T	T	T											S		G	.	.	.	.	.	.	.	.	.	G	G														S		S			S		S				S	S					S	S				S				S		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	A	Q	D	V	D	V	S	M	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	N	M	S	H	S	Q	L	M	Q	L
Template Known Secondary structure		S	S				S			S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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