 |
| Job Description | O13563 | | Confidence | 11.87% | Date | Mon Jul 2 19:10:15 BST 2012 |
| Rank | 22 | Aligned Residues | 25 |
| % Identity | 16% | Template | c1z8rA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:coxsackievirus b4 polyprotein; |
PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51)
|
| Resolution | UNK |
|
|   |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | S | K | S | G | R | I | F | A | L | V | F | S | S | N | . |
. |
. |
. |
. |
. |
. |
E | R | Y | F | F | W | L | Q | E | K | N |
| Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|   |
|   | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|
|   |   |
| Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|
| . |
|
|
|
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|
|
|
|
|
| Template Sequence |   |
Q | C | T | T | G | . |
V | Y | F | C | A | S | K | S | K | H | Y | P | V | S | F | E | G | P | G | L | V | E | V | Q | E | S | E |
| Template Known Secondary structure |   |
|
| S |  |  | . |  |  |  | B | T | T | T |
| S |  |  |  |  |  |
| B |
|
| S |  |  |  |  |
| S | B | T |
| Template Predicted Secondary structure |   |
|
|
|
|  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
57 | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|