Job Description P43603 Confidence 99.48% Date Mon Jul 2 19:24:13 BST 2012 Rank 190 Aligned Residues 53 % Identity 42% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.			.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		K	A	V	A	L	Y	S	F	A	G	E	E	S	G	D	L	P	F	R	K	G	D	V	I	T	I	L	K	K	S	D	S	Q	N	D	W	W	T	G	R	V	.	.	N	G	R	E	G	I	F	P	A	N	Y	V	E	L	V
Query Conservation																																											.	.
Alig confidence																																	.	.	.								.	.
Template Conservation																																	.	.	.
Template Sequence		I	V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	S	G	.	.	.	E	W	W	K	A	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A	R	V
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T									S	S	.	.	.	S							T	T	T								G	G	G
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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