Return to main results Retrieve Phyre Job Id

Job DescriptionP43603
Confidence99.72%DateMon Jul 2 19:24:13 BST 2012
Rank13Aligned Residues72
% Identity31%Templatec1x2qA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:signal transducing adapter molecule 2; PDBTitle: solution structure of the sh3 domain of the signal2 transducing adaptor molecule 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   386...390.........400.........410.........420.........430.........440.........450.........
Predicted Secondary structure 












































Query SS confidence 









































































Query Sequence  QTSQGRFTAPTSPSTSSPKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV
Query Conservation           
  
      
 




 
    



  



 

 
 
  



 

  
  



 





Alig confidence 
















































..






















Template Conservation 


  
               

 

      

    

 
 
     ..  
      
  
 

  


  
Template Sequence  GSSGSSGSEIQLNNKVARKVRALYDFEAVEDNELTFKHGEIIIVLDDSD. . ANWWKGENHRGIGLFPSNFVTTN
Template Known Secondary structure 

S













SS




SSS




SS

S
..SSSTT
GGGS
Template Predicted Secondary structure 































..





Template SS confidence 









































































   1........10.........20.........30.........40......... 50.........60.........70..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions