Phyre 2 alignment of P43603 with c2fg0B_

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Job Description | P43603
Confidence | 30.52% | Date | Mon Jul 2 19:24:13 BST 2012
Rank | 235 | Aligned Residues | 44
% Identity | 16% | Template | c2fg0B_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- | PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
Resolution | 1.79 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 411 | . | . | . | . | . | . | . | . |  |  | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . |  |  | . | . | . | . | . | 450 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | A | G | E | E | S | G | D | L | . | . | P | F | R | K | G | D | V | I | T | I | L | K | K | S | D | S | Q | N | D | W | W | T | G | R | V | . | . | N | G | R | E | G | I | F | P | A | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | D | S | P | E | C | T | R | L | A | T | Q | S | A | S | G | R | H | L | W | V | T | S | N | H | Q | . | . | N | L | A | V | E | V | Y | L | C | E | D | D | Y | P | G | W | L | S | L | S | D | F
Template Known Secondary structure |  |  | S | S | T | T |  |  | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | . | . | T | T |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  | G | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |  |  | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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