Phyre 2 alignment of P43603 with c1m9sA_

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Job Description | P43603
Confidence | 23.89% | Date | Mon Jul 2 19:24:13 BST 2012
Rank | 240 | Aligned Residues | 34
% Identity | 15% | Template | c1m9sA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:internalin b; | PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution | 2.65 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 423 | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . |  |  | . | 440 | . | . | . | . |  | . | . | . | . | . | 450 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | G | D | V | I | T | I | L | K | K | S | D | S | Q | N | D | . | . | W | W | T | G | R | V | . | N | G | R | E | G | I | F | P | A | N | Y | V | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | N | Q | K | L | I | V | D | C | Q | A | T | I | . | E | G | Q | L | W | Y | R | I | R | T | S | S | T | F | I | G | W | T | K | A | A | N | L | R
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | G | G | G |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 591 | . | . | . | . | . | . | . | . | 600 | . | . | . |  | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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