Job Description P32790 Confidence 42.11% Date Mon Jul 2 19:16:44 BST 2012 Rank 280 Aligned Residues 91 % Identity 10% Template d1d7qa_ SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		T	P	E	E	L	A	I	.	Q	E	D	D	L	L	Y	L	L	Q	K	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	E	P	V	G	L	V	P	S	T	Y	I	E	E	A	P	V	L	K	K	V	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	E	E	L	T	F	H	E	N	D
Query Conservation									.
Alig confidence									.																					.	.	.	.																																		.	.	.	.	.						.	.
Template Conservation																														.	.	.	.																																		.	.	.	.	.						.	.
Template Sequence		E	K	R	E	L	V	F	K	E	D	G	Q	E	Y	A	Q	V	I	K	M	L	G	N	G	R	L	E	A	.	.	.	.	M	C	F	D	G	V	K	R	L	C	H	I	R	G	K	L	R	K	K	V	W	I	N	T	S	D	I	I	L	V	G	L	R	.	.	.	.	.	D	Y	Q	D	N	.	.	K	A	D
Template Known Secondary structure											T	T											S	S	S					.	.	.	.			T	T	T									S	G	G	G	G	S					T	T								S	.	.	.	.	.	S	S	S	S	S	.	.
Template Predicted Secondary structure																														.	.	.	.																																		.	.	.	.	.						.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100			.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	D	V	F	D	D	K	D	A	D	W	L	L	V	K	S	T	V	S	N	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	L	K	Y	N	A	D	E	A	R	S	L	K	A	Y	G	E	L	P	E	H	A
Template Known Secondary structure								T	T	T								T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions