Job Description P32790 Confidence 89.16% Date Mon Jul 2 19:16:44 BST 2012 Rank 233 Aligned Residues 112 % Identity 16% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																																.	.	.	.	.	.	.	.																						.	.
Query Sequence		A	I	Q	E	D	D	L	L	Y	L	L	Q	K	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	E	P	V	G	L	V	P	S	T	Y	I	E	E	A	.	.	.	.	.	.	.	.	P	V	L	K	K	V	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	E	E	.	.	L	T	F
Query Conservation																																																.	.	.	.	.	.	.	.																						.	.
Alig confidence																								.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																						.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		A	V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	.	.	.	.	.	.	.	E	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D	D	A	F	X	T	R	Y	E	S	G	S	L	A	A	I	L	R	D	D	T	S	L	N	G	A	D	G	T	H	L	A	T	A
Template Known Secondary structure					T	T										T	T	S	S					.	.	.	.	.	.	.			S	S							G	G	G														S	S							S	T	T						T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	N	D	V	F	D	V	F	D	D	K	D	A	D	W	L	L	V	K	S	T	V	S	N	E	F	G	F	I	P	G	N	Y	V	E	P	E	N	G	S	T	S	K	Q	E	Q	A	P	A
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		H	I	G	T	V	L	P	L	S	G	.	A	S	Q	V	G	R	T	V	L	V	P	V	R	A	P	E	G	H	A	V	V	V	P	V	L	L	T	S	G	E	A	A	Q	K	P	V	P	L	T
Template Known Secondary structure			T	T								.			S	S											T	T	S	B										T	T	T				S	S
Template Predicted Secondary structure												.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions