Job Description P32790 Confidence 80.96% Date Mon Jul 2 19:16:44 BST 2012 Rank 239 Aligned Residues 57 % Identity 19% Template c3iyoA_ PDB info PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: cryo-em model of virion-sized hev virion-sized capsid Resolution 10.50 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	E	P	V	G	L	V	P	S	T	Y	I	E	E	A	P	V	L	K	K	V	.	.	.	.	.	.	.	.	.	.	.	.	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	E	E	.	.	.	.	.	.	.	.	.	.	.	.	L	T	F	H	E	N
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																									.	.	.	.	.	.	.	.	.	.	.	.								.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																												.	.
Template Sequence		G	Q	L	F	Y	S	R	P	V	.	.	V	S	A	N	G	E	P	T	V	K	L	Y	T	S	V	E	N	A	Q	Q	D	K	G	I	A	I	P	H	D	I	D	L	G	E	S	R	V	V	I	Q	D	Y	D	.	.	N	Q	H	E	Q	D	R	P	T	P	S	P	A	P	S	R	P	F	S	V	L	R	A	N
Template Known Secondary structure		S									.	.			S	S		S							S	S						T	T						S	S						S								S		.	.				S	T	T	S				S	S	S					G	G	G			S	S
Template Predicted Secondary structure											.	.																																												.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.			.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		96	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	F	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	W	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions