Job Description P32790 Confidence 99.46% Date Mon Jul 2 19:16:44 BST 2012 Rank 183 Aligned Residues 52 % Identity 35% Template c2x3wD_ PDB info PDB header:endocytosis Chain: D: PDB Molecule:protein kinase c and casein kinase substrate in neurons PDBTitle: structure of mouse syndapin i (crystal form 2) Resolution 2.64 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Y	R	A	V	Y	A	Y	E	P	Q	T	P	E	E	L	A	I	Q	E	D	D	L	L	Y	L	L	Q	K	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	.	E	P	V	G	L	V	P	S	T	Y	I	E
Query Conservation																																																	.
Alig confidence																																						.	.	.	.	.	.	.					.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		V	R	A	L	Y	D	Y	D	G	Q	E	Q	D	E	L	S	F	K	A	G	D	E	L	T	K	L	G	E	E	D	E	Q	G	W	C	R	.	.	.	.	.	.	.	G	R	L	D	S	G	Q	L	G	L	Y	P	A	N	Y	V	E
Template Known Secondary structure						S		B			S	S	S	S	B			B		T	T							S				S	S	S				.	.	.	.	.	.	.				S	S								G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.								.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions