Job Description P32790 Confidence 24.74% Date Mon Jul 2 19:16:44 BST 2012 Rank 338 Aligned Residues 85 % Identity 15% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

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		24	.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	E	D	D	L	L	Y	L	.	.	.	.	.	.	.	.	.	.	.	L	Q	K	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	E	P	V	G	L	V	P	S	T	Y	I	E	E	A	P	V	L	K	K	V	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	E	E	L	T	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.		.										.	.	.	.	.	.	.						.																									.	.	.	.
Template Conservation																							.										.	.	.	.	.	.	.						.																									.	.	.	.
Template Sequence		W	Q	R	D	K	E	L	W	L	F	P	V	G	I	E	A	L	I	G	K	V	.	R	F	S	R	L	G	I	K	L	.	.	.	.	.	.	.	A	E	T	H	N	.	K	G	Y	R	W	Q	H	E	A	V	I	A	L	A	S	P	D	N	X	N	A	F	E	L	.	.	.	.	T	P	Q	E	A	E	E	W
Template Known Secondary structure				S	S	S											T	T	B	T	T	B	.			S			S				.	.	.	.	.	.	.					T	.	T													B		S	S	S	S	S					.	.	.	.
Template Predicted Secondary structure																							.										.	.	.	.	.	.	.						.																									.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.								.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	N	D	V	F	D	V	F	D	D	K	D	A	D	W	L	L	V	K	S	T	V	S	N	E	F	G	F	I
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		Y	R	G	R	D	V	Y	P	Q	A	A	P	V	A	D	D	V	L	V	.	T	F	Q	H	Q	P	I	G	L	A
Template Known Secondary structure			T	T						S	S			S		S					.		S	S	S	S
Template Predicted Secondary structure																					.
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions