Job Description P32790 Confidence 21.50% Date Mon Jul 2 19:16:44 BST 2012 Rank 362 Aligned Residues 61 % Identity 16% Template c2ba1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		24	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																					.	.	.	.
Query SS confidence											.																					.	.	.	.
Query Sequence		I	Q	E	D	D	L	L	Y	L	.	L	Q	K	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	.	.	.	.	S	E	E	P	V	G	L	V	P	S	T	Y	I	E	E	A	P	V	L	K	K	V	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	E	E	L	T	F	H	E	N	D	V	F
Query Conservation											.																					.	.	.	.
Alig confidence											.						.															.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		I	V	K	G	D	V	V	L	G	R	V	V	D	L	R	.	N	S	I	A	L	I	E	V	S	S	K	K	G	E	N	R	G	P	S	N	R	G	I	G	I	L	H	V	S	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	Y	V	K	E	I	S	E	A	.	.	V	G	Y	L	D	I	L
Template Known Secondary structure				T	T												.	T	T										T	T		S	S			S	S								T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S				S	S	T	T	T	.	.			S	S
Template Predicted Secondary structure																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.
		99	100
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		119	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions