Job Description P32790 Confidence 99.98% Date Mon Jul 2 19:16:44 BST 2012 Rank 3 Aligned Residues 148 % Identity 20% Template c1ng2A_ PDB info PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	I	Y	R	A	V	Y	A	Y	E	P	Q	T	P	E	E	L	A	I	Q	E	D	D	L	L	Y	L	L	Q	K	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	E	P	V	G	L	V	P	S	T	Y	I	E	E	A	P	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.						.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.						.	.	.	.	.	.	.
Template Sequence		L	Q	T	Y	R	A	I	A	D	Y	E	K	T	S	G	S	E	M	A	L	S	T	G	D	V	V	E	V	V	E	K	S	E	.	S	G	W	W	F	.	.	.	.	.	.	.	C	Q	M	K	A	K	R	G	W	I	P	A	S	F	L	E	P	L	D	S	P	D	E	T	E	D	P	E	P	N	Y	A	G	E
Template Known Secondary structure								S	S		B			S	S	T	T				B		T	T										T	.	T	S				.	.	.	.	.	.	.												G	G	G				S	S		S	S		S							T	T
Template Predicted Secondary structure																																			.						.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	E	E	L	T	F	H	E	N	D	V	F	D	V	F	D	D	K	D	A	D	W	L	L	V	K	S	T	V	S	N	E	F	G	F	I	P	G	N	Y	V	E	P	E	N	G	S	T	S	K	Q	E	Q	A	P	A	A	A	E	A	P	A	A	T	P	A
Query Conservation
Alig confidence											.	.																														.	.
Template Conservation											.	.																														.	.
Template Sequence		P	Y	V	A	I	K	A	Y	T	.	.	A	V	E	G	D	E	V	S	L	L	E	G	E	A	V	E	V	I	H	K	L	L	D	G	W	W	V	I	R	.	.	K	D	D	V	T	G	Y	F	P	S	M	Y	L	Q	K	S	G	Q	D	V	S	Q	A	Q	R	Q	I	K	R	G	A	P	P	R	R	S	S	I
Template Known Secondary structure						S	S		B		.	.			S	T	T	B			B		T	T										T	T	S						.	.		T	T							G	G	G				T	T	S								T			S						G	G	G
Template Predicted Secondary structure											.	.																														.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	P	A	S	A	A	V	L	P	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	A	H	S	I	H	Q	R	S	R	K
Template Known Secondary structure		S	S				S		S	S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions