Job Description P32790 Confidence 94.49% Date Mon Jul 2 19:16:44 BST 2012 Rank 230 Aligned Residues 115 % Identity 17% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																				.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																				.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	Y	R	A	V	Y	A	Y	E	P	.	Q	T	P	E	E	L	A	I	Q	E	D	D	L	L	Y	L	L	Q	K	.	.	S	D	I	D	D	W	W	T	V	K	K	R	V	I	G	S	D	S	E	E	P	V	.	G	L	V	P	S	T	Y	I	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.																				.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																				.	.									.	.	.	.	.	.	.								.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		S	V	W	T	K	P	Y	N	T	A	G	A	K	H	V	N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	.	.	.	.	.	.	.	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L	T	R
Template Known Secondary structure				B	S	S	S	S	S	S	T	T							G	G	G	G		S	S											S	S						.	.	.	.	.	.	.				T	T								T	T	T							G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.								530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
				69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.																	.	.	.
Query SS confidence		.	.																				.	.																	.	.	.
Query Sequence		.	.	P	V	L	K	K	V	R	A	I	Y	D	Y	E	Q	V	Q	N	A	D	.	.	E	E	L	T	F	H	E	N	D	V	F	D	V	F	D	D	.	.	.	K	D	A	D	W	L	L	V	K	S	T	V	S	N	E	F	G	F	I	P	G	N	Y	V	E
Query Conservation		.	.																				.	.																	.	.	.
Alig confidence		.	.																				.	.																	.	.	.											.
Template Conservation																																																						.
Template Sequence		Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	T	.	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure					T	T	T	T	T	S				S	S	S	S			G	G	G					G	G	G	S	T	T												T	T									.	S	S	S							G	G	G
Template Predicted Secondary structure																																																						.
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.		.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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