Return to main results Retrieve Phyre Job Id

Job DescriptionO13516
Confidence4.14%DateMon Jul 2 19:10:06 BST 2012
Rank81Aligned Residues84
% Identity11%Templatec3uxkA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:mandelate racemase; PDBTitle: p. putida mandelate racemase co-crystallized with the intermediate2 analogue benzohydroxamate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50...... ...60.........70.........80.........90........ .100.........110.........120..
Predicted Secondary structure  ..














...







Query SS confidence 








. .









































. . .























Query Sequence  QLSKIRRAA. . RDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLA. . . LKVEDFLERRLQTQVYKLGLAKSV
Query Conservation   
 


  
..
 
  
      
      

 

   


      
  
  ...
 
   





  
 
   
 
 
Alig confidence 








..





























.....






...























Template Conservation   
  

   
    
 



       
      
    
 ..... 



    
      
     



 


    
Template Sequence  VVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVT. . . . . WIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGP
Template Known Secondary structure 
SSS
TT
S
TT
S.....

S
TT
TT
SS

TT

S
Template Predicted Secondary structure 













.....















Template SS confidence 















































































   178.180.........190.........200.........210........ .220.........230.........240.........250..
 
   123......130......
Predicted Secondary structure 


Query SS confidence 













Query Sequence  HHARVLITQRHIAV
Query Conservation    




 



 
Alig confidence 













Template Conservation        
       
Template Sequence  EEMFKALSIGACRL
Template Known Secondary structure  TT

S
Template Predicted Secondary structure 




Template SS confidence 













   253......260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions