Job Description O13516 Confidence 93.64% Date Mon Jul 2 19:10:06 BST 2012 Rank 23 Aligned Residues 55 % Identity 16% Template c3iz6D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	Q	T	Q	V	Y	K	.	L	G	L	A	K	S	V	H	H	A	R	V	L	I	T	Q	R	H	I	A	V	G	K	Q	I	V	N	I	P	S	F	M	V	R	L	D	S	E	K	H	I	D	F	A	P	T	S	P	F	G
Query Conservation									.
Alig confidence									.																																					.	.
Template Conservation																																														.	.
Template Sequence		L	I	L	I	I	R	N	R	L	K	Y	A	L	T	Y	R	E	V	I	S	I	L	M	Q	R	H	V	L	V	D	G	K	V	R	T	D	K	T	Y	P	A	G	F	M	.	.	D	V	I	S	I	P	K	T	G	E	N	Y
Template Known Secondary structure											T	T	S	S		S	S	S	T						T	T					T	T						T	T					T	T	.	.							S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions