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3 | . | . | . | . | . | . | 10 | . | |
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. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
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. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
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. | 50 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| Query SS confidence |   |
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| Query Sequence |   |
E | V | T | K | M | L | Y | C | A | . |
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L | L | V | T | K | V | I | Y | Q | M | K | G | K | S | Q | P | K | R | E | R | K | K | . |
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Q | N | Y | W | V | L | K | S | L | W | K | R | P | Q | R | . |
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Q | A | I | M | S | K |
| Query Conservation |   |
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| Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . |
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| Template Conservation |   |
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| Template Sequence |   |
F | V | F | L | L | K | K | V | N | R | E | R | M | M | R | Y | C | M | D | Y | A | R | Y | S | K | K | I | L | Q | L | K | H | L | P | V | N | K | K | T | L | T | K | M | G | R | F | V | G | Y | R | N | Y | G | V | I | R | E | L | Y | A | D | V | F | R | D | V | Q | G | F | R | G | P | K | M | T | A | A | M | R | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
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| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| Template SS confidence |   |
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|   |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
|   |
|   |   |
55 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
| Query SS confidence |   |
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| Query Sequence |   |
L | Y | S | K |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
  |   |   |   |
| Template Sequence |   |
Y | S | S | K |
| Template Known Secondary structure |   |
 |  |  | S |
| Template Predicted Secondary structure |   |
 |  |  |
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| Template SS confidence |   |
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|   |   |
124 | . | . | . |
|   |