 |
| Job Description | O13549 | | Confidence | 2.32% | Date | Mon Jul 2 19:10:13 BST 2012 |
| Rank | 63 | Aligned Residues | 22 |
| % Identity | 27% | Template | c1aikC_ |
| PDB info |
PDB header:viral protein | Chain: C: PDB Molecule:hiv-1 gp41 glycoprotein; |
PDBTitle: hiv gp41 core structure
|
| Resolution | 2.00 Å |
|
| | |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | |
|
|
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | T | K | V | I | Y | Q | M | K | G | K | S | Q | P | K | R | E | R | K | K | Q | N |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | |
|
| |
|
|
| |
|
| |
|
|
|
|
|
| | |
| Template Sequence | |
Y | T | S | L | I | H | S | L | I | E | E | S | Q | N | Q | Q | E | K | N | E | Q | E |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
638 | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
