Email l.a.kelley@imperial.ac.uk Description O13525 Date Mon Jul 2 19:10:08 BST 2012 Unique Job ID bc7305d66fcb2afe

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3kb4D_ 100.0 19 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr8543 protein; PDBTitle: crystal structure of the alr8543 protein in complex with2 geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc3 7120, northeast structural genomics consortium target nsr141 2 c3msqC_ 100.0 18 PDB header:biosynthetic protein Chain: C: PDB Molecule:putative ubiquinone biosynthesis protein; PDBTitle: crystal structure of a putative ubiquinone biosynthesis protein2 (npun02000094) from nostoc punctiforme pcc 73102 at 2.85 a resolution 3 d1eexg_ 37.4 19 Fold:Open three-helical up-and-down bundle Superfamily:Diol dehydratase, gamma subunit Family:Diol dehydratase, gamma subunit 4 c2l6gA_ 36.1 41 PDB header:transferase,cell adhesion Chain: A: PDB Molecule:focal adhesion kinase 1, linker, paxillin; PDBTitle: fat-ld2 double labeled construct with free ld4 peptide 5 c1uc5M_ 33.9 19 PDB header:lyase Chain: M: PDB Molecule:diol dehydrase gamma subunit; PDBTitle: structure of diol dehydratase complexed with (r)-1,2-2 propanediol 6 d1iwpg_ 30.3 19 Fold:Open three-helical up-and-down bundle Superfamily:Diol dehydratase, gamma subunit Family:Diol dehydratase, gamma subunit 7 c2lnaA_ 28.9 26 PDB header:hydrolase Chain: A: PDB Molecule:afg3-like protein 2; PDBTitle: solution nmr structure of the mitochondrial inner membrane domain2 (residues 164-251), ftsh_ext, from the paraplegin-like protein afg3l23 from homo sapiens, northeast structural genomics consortium target4 hr6741a 8 c3r4hD_ 26.4 39 PDB header:de novo protein Chain: D: PDB Molecule:coiled coil helix cc-tet-phi22; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22 9 c3r4aA_ 25.7 39 PDB header:de novo protein Chain: A: PDB Molecule:coiled coil helix cc-tet; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet 10 c3r4aC_ 25.5 39 PDB header:de novo protein Chain: C: PDB Molecule:coiled coil helix cc-tet; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet 11 c3r4aD_ 25.4 39 PDB header:de novo protein Chain: D: PDB Molecule:coiled coil helix cc-tet; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet 12 c2uv1B_ 25.3 75 PDB header:inhibitor Chain: B: PDB Molecule:host-nuclease inhibitor protein gam; PDBTitle: hexagonal crystal form of gams from bacteriophage lambda. 13 c3r4hF_ 25.2 39 PDB header:de novo protein Chain: F: PDB Molecule:coiled coil helix cc-tet-phi22; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22 14 c3r4aB_ 25.0 39 PDB header:de novo protein Chain: B: PDB Molecule:coiled coil helix cc-tet; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet 15 c3r4hB_ 24.8 39 PDB header:de novo protein Chain: B: PDB Molecule:coiled coil helix cc-tet-phi22; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22 16 c3r4hC_ 24.8 39 PDB header:de novo protein Chain: C: PDB Molecule:coiled coil helix cc-tet-phi22; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22 17 c3r4hA_ 24.8 39 PDB header:de novo protein Chain: A: PDB Molecule:coiled coil helix cc-tet-phi22; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22 18 c3r4hE_ 23.6 40 PDB header:de novo protein Chain: E: PDB Molecule:coiled coil helix cc-tet-phi22; PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22 19 c3dkaA_ 18.9 19 PDB header:unknown function Chain: A: PDB Molecule:dinb-like protein; PDBTitle: crystal structure of a dinb-like protein (yjoa, bsu12410) from2 bacillus subtilis at 2.30 a resolution 20 d1a9xa1 16.9 18 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 21 c2k7rA_ not modelled 15.5 18 PDB header:replication Chain: A: PDB Molecule:primosomal protein dnai; PDBTitle: n-terminal domain of the bacillus subtilis helicase-loading2 protein dnai 22 c1or7A_ not modelled 15.4 6 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea 23 c1ykuB_ not modelled 15.2 18 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein pxo2-61; PDBTitle: crystal structure of a sensor domain homolog 24 d2f23a1 not modelled 15.0 30 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 25 d2pjqa1 not modelled 14.2 7 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 26 c2vcbA_ not modelled 13.7 27 PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase; PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac 27 c3gw7A_ not modelled 13.5 16 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein yedj; PDBTitle: crystal structure of a metal-dependent phosphohydrolase2 with conserved hd domain (yedj) from escherichia coli in3 complex with nickel ions. northeast structural genomics4 consortium target er63 28 c2ff4B_ not modelled 13.3 20 PDB header:transcription Chain: B: PDB Molecule:probable regulatory protein embr; PDBTitle: mycobacterium tuberculosis embr in complex with low affinity2 phosphopeptide 29 c3pmdA_ not modelled 12.3 19 PDB header:lipid binding protein Chain: A: PDB Molecule:conserved domain protein; PDBTitle: crystal structure of the sporulation inhibitor pxo1-118 from bacillus2 anthracis 30 d1yfna1 not modelled 12.1 29 Fold:SspB-like Superfamily:SspB-like Family:Stringent starvation protein B, SspB 31 c3d5pB_ not modelled 11.9 23 PDB header:gene regulation Chain: B: PDB Molecule:putative glucan synthesis regulator of smi1/knr4 family; PDBTitle: crystal structure of a putative glucan synthesis regulator of2 smi1/knr4 family (bf1740) from bacteroides fragilis nctc 9343 at 1.453 a resolution 32 c3zs9C_ not modelled 11.8 38 PDB header:hydrolase/transport protein Chain: C: PDB Molecule:golgi to er traffic protein 2; PDBTitle: s. cerevisiae get3-adp-alf4- complex with a cytosolic get2 fragment 33 d1ou9a_ not modelled 11.4 36 Fold:SspB-like Superfamily:SspB-like Family:Stringent starvation protein B, SspB 34 d1ou8a_ not modelled 11.3 36 Fold:SspB-like Superfamily:SspB-like Family:Stringent starvation protein B, SspB 35 c3zs9D_ not modelled 11.2 38 PDB header:hydrolase/transport protein Chain: D: PDB Molecule:golgi to er traffic protein 2; PDBTitle: s. cerevisiae get3-adp-alf4- complex with a cytosolic get2 fragment 36 d3dtoa1 not modelled 10.8 9 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 37 d1zszc1 not modelled 10.7 29 Fold:SspB-like Superfamily:SspB-like Family:Stringent starvation protein B, SspB 38 d1ufia_ not modelled 10.4 24 Fold:ROP-like Superfamily:Dimerisation domain of CENP-B Family:Dimerisation domain of CENP-B 39 d1b76a2 not modelled 10.2 27 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 40 d2prva1 not modelled 10.2 14 Fold:SMI1/KNR4-like Superfamily:SMI1/KNR4-like Family:SMI1/KNR4-like 41 d3proc1 not modelled 9.5 21 Fold:Alpha-lytic protease prodomain-like Superfamily:Alpha-lytic protease prodomain Family:Alpha-lytic protease prodomain 42 c3hugA_ not modelled 9.4 14 PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl 43 d1or7a1 not modelled 9.1 6 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 44 d1ka8a_ not modelled 8.5 5 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:P4 origin-binding domain-like 45 d1xu2r_ not modelled 8.1 55 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:BAFF receptor-like 46 c1xu2R_ not modelled 8.1 55 PDB header:cytokine, hormone/growth factor receptor Chain: R: PDB Molecule:tumor necrosis factor receptor superfamily member 17; PDBTitle: the crystal structure of april bound to bcma 47 d1m9fd_ not modelled 7.9 22 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 48 d1aisb1 not modelled 7.9 14 Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain 49 d1k1xa1 not modelled 7.9 25 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Families 57/38 glycoside transferase middle domain Family:4-alpha-glucanotransferase, domain 2 50 c3sjdE_ not modelled 7.8 33 PDB header:hydrolase/transport protein Chain: E: PDB Molecule:golgi to er traffic protein 2; PDBTitle: crystal structure of s. cerevisiae get3 with bound adp-mg2+ in complex2 with get2 cytosolic domain 51 d2g4ca2 not modelled 7.8 32 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 52 d2pq7a1 not modelled 7.7 14 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 53 d2paga1 not modelled 7.6 19 Fold:SMI1/KNR4-like Superfamily:SMI1/KNR4-like Family:SMI1/KNR4-like 54 d3djba1 not modelled 7.6 6 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 55 d2icga1 not modelled 7.6 10 Fold:SMI1/KNR4-like Superfamily:SMI1/KNR4-like Family:SMI1/KNR4-like 56 d1y0ua_ not modelled 7.5 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ArsR-like transcriptional regulators 57 c2auaB_ not modelled 7.5 36 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: structure of bc2332: a protein of unknown function from bacillus2 cereus 58 c1ufiD_ not modelled 7.5 23 PDB header:dna binding protein Chain: D: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of the dimerization domain of human cenp-b 59 c2jo8B_ not modelled 7.4 30 PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase 4; PDBTitle: solution structure of c-terminal domain of human mammalian2 sterile 20-like kinase 1 (mst1) 60 c3ikmC_ not modelled 7.3 32 PDB header:transferase Chain: C: PDB Molecule:dna polymerase subunit gamma-2; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme 61 d2r7ca2 not modelled 6.9 30 Fold:Rotavirus NSP2 fragment, N-terminal domain Superfamily:Rotavirus NSP2 fragment, N-terminal domain Family:Rotavirus NSP2 fragment, N-terminal domain 62 d2ff4a2 not modelled 6.9 30 Fold:alpha-alpha superhelix Superfamily:TPR-like Family:BTAD-like 63 c2a3dA_ not modelled 6.6 47 PDB header:three-helix bundle Chain: A: PDB Molecule:protein (de novo three-helix bundle); PDBTitle: solution structure of a de novo designed single chain three-2 helix bundle (a3d) 64 c3nr7A_ not modelled 6.6 17 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein h-ns; PDBTitle: crystal structure of s. typhimurium h-ns 1-83 65 c2rq5A_ not modelled 6.4 16 PDB header:transcription Chain: A: PDB Molecule:protein jumonji; PDBTitle: solution structure of the at-rich interaction domain (arid)2 of jumonji/jarid2 66 c2lfwA_ not modelled 6.4 9 PDB header:signaling protein Chain: A: PDB Molecule:phyr sigma-like domain; PDBTitle: nmr structure of the phyrsl-nepr complex from sphingomonas sp. fr1 67 d1yira2 not modelled 6.3 13 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like 68 d2bpa1_ not modelled 6.3 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:ssDNA viruses Family:Microviridae-like VP 69 c2b6gA_ not modelled 6.3 15 PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain 70 c2fmmE_ not modelled 6.3 20 PDB header:transcription Chain: E: PDB Molecule:protein emsy; PDBTitle: crystal structure of emsy-hp1 complex 71 d1xl3c1 not modelled 6.1 25 Fold:Type III secretion system domain Superfamily:Type III secretion system domain Family:TyeA-like 72 d1vaja1 not modelled 6.1 13 Fold:AMMECR1-like Superfamily:AMMECR1-like Family:AMMECR1-like 73 c2ylaA_ not modelled 6.1 18 PDB header:hydrolase Chain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis 74 d1kvpa_ not modelled 5.9 36 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:ssDNA viruses Family:Microviridae-like VP 75 d2ivda2 not modelled 5.7 13 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:L-aminoacid/polyamine oxidase 76 d1mtyg_ not modelled 5.7 19 Fold:Open three-helical up-and-down bundle Superfamily:Methane monooxygenase hydrolase, gamma subunit Family:Methane monooxygenase hydrolase, gamma subunit 77 c3mzyA_ not modelled 5.7 16 PDB header:rna binding protein Chain: A: PDB Molecule:rna polymerase sigma-h factor; PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a 78 c2l6fA_ not modelled 5.5 21 PDB header:transferase,cell adhesion Chain: A: PDB Molecule:focal adhesion kinase 1, linker1, paxillin, linker2, PDBTitle: nmr solution structure of fat domain of fak complexed with ld2 and ld42 motifs of paxillin 79 d1atia2 not modelled 5.4 27 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 80 d1seza2 not modelled 5.4 18 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:L-aminoacid/polyamine oxidase 81 d1g5ha2 not modelled 5.3 23 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 82 d1ybea2 not modelled 5.3 17 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like