Job Description O13525 Confidence 100.00% Date Mon Jul 2 19:10:08 BST 2012 Rank 2 Aligned Residues 195 % Identity 18% Template c3msqC_ PDB info PDB header:biosynthetic protein Chain: C: PDB Molecule:putative ubiquinone biosynthesis protein; PDBTitle: crystal structure of a putative ubiquinone biosynthesis protein2 (npun02000094) from nostoc punctiforme pcc 73102 at 2.85 a resolution Resolution 2.85 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		F	A	I	S	G	W	N	S	F	F	H	P	E	D	G	Y	N	.	.	I	V	Q	L	G	E	A	T	A	L	P	V	F	L	E	N	L	K	Q	T	M	L	S	D	S	S	G	R	R	I	L	K	E	Q	P	N	I	T	T	E	I	L	H	M	D	K	L	A	K	L	P	H	N	T	F	G	Y	V	Y	Y	Q
Query Conservation																			.	.
Alig confidence																			.	.																																						.	.
Template Conservation																																																										.	.
Template Sequence		G	L	L	A	Y	I	Q	F	L	A	S	S	A	Q	G	N	T	D	R	V	F	D	F	E	D	A	L	D	Q	T	Q	X	A	Q	L	A	V	D	E	L	K	K	I	P	E	V	N	A	L	F	S	E	R	W	L	P	.	.	A	P	F	N	L	D	D	L	A	K	L	P	E	G	T	L	G	H	V	Y	A	R
Template Known Secondary structure														T														T	T	T	S											T	T	S										T				.	.										T	S		T	T	B
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	K	R	E	N	V	S	P	D	T	R	A	P	V	K	F	I	D	D	P	M	H	A	Y	I	F	K	R	Y	R	Q	C	H	D	F	Y	H	A	I	T	N	M	P	I	I	I	E	G	E	I	T	I	K	A	L	E	G	A	N	L	G	V	P	M	A	I	L	G	G	I	L	A	P	L	R	L	K	K	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		E	X	K	A	R	F	Y	K	K	V	P	V	.	.	.	.	.	.	.	V	D	D	I	S	Y	L	K	X	L	W	R	S	T	H	D	I	Y	H	V	V	A	G	F	D	T	N	V	F	G	E	I	G	L	Q	A	F	F	L	A	Q	T	P	I	P	I	S	V	X	L	L	S	F	G	X	V	X	I	S	L	Y
Template Known Secondary structure														.	.	.	.	.	.	.		S																					T			S	S															S
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		257	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure							.	.																.
Query SS confidence							.	.																.
Query Sequence		Q	R	K	R	L	.	.	Y	N	I	Y	L	P	W	A	V	R	T	G	L	S	C	.	K	P	L	I	N	V	Y	W	E	E	M	L	E	K	D	V	T	A	L	R	K	E	L	K	I	T
Query Conservation							.	.																.
Alig confidence							.	.																.
Template Conservation
Template Sequence		Q	P	T	N	F	K	A	L	X	T	E	I	S	R	G	Y	R	V	G	S	H	T	P	G	K	L	I	A	Q	K	W	D	Q	L	W	D	V	Q	V	S	E	I	R	E	R	L	G	V	N
Template Known Secondary structure			G	G	G																	T			S		S	T	T			G	G	G	S	T	T	S	B									T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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