Job Description O13535 Confidence 86.04% Date Mon Jul 2 19:10:10 BST 2012 Rank 60 Aligned Residues 82 % Identity 12% Template d2fmba_ SCOP info Acid proteases Acid proteases Retroviral protease (retropepsin) Resolution 1.80

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		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	S	G	A	S	R	T	L	I	R	S	A	H	H	I	H	S	A	S	S	N	P	D	I	N	V	V	D	A	Q	K	R	N	I	P	I	N	A	I	G	D	L	Q	F	H	F	Q	D	N	T	K	T	S	I	K	V	L	H	T	P	N	I	A	Y	D	L	L	S	L	N	E	L	A	A	V	D	I	T
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		L	L	D	T	G	A	D	T	S	V	L	T	T	A	H	Y	N	R	L	K	Y	R	G	R	K	Y	Q	G	T	G	I	G	G	V	G	G	N	V	E	T	F	.	S	T	P	V	T	I	K	K	K	G	R	H	I	K	T	R	M	L	V	A	D	I	P	V	T	I	L	G	R	D	I	L	Q	D	L	G	A	K
Template Known Secondary structure					T	T		S	S												S	S													T	T							.									T	T											S		S	S												T
Template Predicted Secondary structure																																											.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		577	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		102	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions