Job Description O13535 Confidence 94.64% Date Mon Jul 2 19:10:10 BST 2012 Rank 49 Aligned Residues 77 % Identity 14% Template d1siva_ SCOP info Acid proteases Acid proteases Retroviral protease (retropepsin) Resolution 2.50

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		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	S	G	A	S	R	T	L	I	R	S	A	H	H	I	H	S	A	S	S	N	P	D	I	N	V	V	D	A	Q	K	R	N	I	P	I	N	A	I	G	D	L	Q	F	H	F	Q	D	N	T	K	T	S	I	K	V	L	H	T	P	N	I	A	Y	D	L	L	S	L	N	E	L	A	A	V	D	I	T
Query Conservation
Alig confidence																		.	.	.	.																																					.	.
Template Conservation																		.	.	.	.																																					.	.
Template Sequence		L	L	D	T	G	A	D	D	S	I	V	T	G	I	E	L	.	.	.	.	G	P	H	Y	T	P	K	I	V	G	G	I	G	G	F	I	N	T	K	E	Y	K	N	V	K	I	E	V	L	G	K	R	I	K	G	T	.	.	I	M	T	G	D	T	P	I	N	I	F	G	R	N	L	L	T	A	L	G	M	S
Template Known Secondary structure					T	T		S	S					S				.	.	.	.		S										S	S																T	T							.	.					S		S	S											T	T
Template Predicted Secondary structure																		.	.	.	.																																					.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		577	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		97	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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