Job Description O13535 Confidence 84.23% Date Mon Jul 2 19:10:10 BST 2012 Rank 61 Aligned Residues 79 % Identity 20% Template d1nsoa_ SCOP info Acid proteases Acid proteases Retroviral protease (retropepsin) Resolution UNK

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		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		L	L	D	S	G	A	S	R	T	L	I	R	S	A	H	H	I	H	S	A	S	S	N	P	D	I	N	V	V	D	A	.	Q	K	R	N	I	P	I	N	A	I	G	D	L	Q	F	H	F	Q	D	N	T	K	T	S	I	K	V	L	H	T	P	N	I	A	Y	D	L	L	S	L	N	E	L	A	A	V	D	I
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		L	I	N	T	G	A	D	V	T	I	I	K	L	E	D	W	P	P	N	W	P	I	T	D	T	L	T	N	L	R	G	I	G	Q	S	N	N	P	K	Q	S	S	K	Y	L	T	W	R	D	K	E	N	N	S	G	L	I	K	P	F	V	I	P	N	L	P	V	N	L	W	G	R	D	L	L	S	Q	M	K	I
Template Known Secondary structure					S	S		S	S		B			G	G	G	S		T	T	S											S	S	S								B									T	T	T								B	B		T	T					B											T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions