Job Description O13535 Confidence 95.66% Date Mon Jul 2 19:10:10 BST 2012 Rank 46 Aligned Residues 77 % Identity 14% Template d1nh0a_ SCOP info Acid proteases Acid proteases Retroviral protease (retropepsin) Resolution 1.03

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		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	S	G	A	S	R	T	L	I	R	S	A	H	H	I	H	S	A	S	S	N	P	D	I	N	V	V	D	A	Q	K	R	N	I	P	I	N	A	I	G	D	L	Q	F	H	F	Q	D	N	T	K	T	S	I	K	V	L	H	T	P	N	I	A	Y	D	L	L	S	L	N	E	L	A	A	V	D	I	T
Query Conservation
Alig confidence																		.	.	.	.																																					.	.
Template Conservation																		.	.	.	.																																					.	.
Template Sequence		L	L	D	T	G	A	D	D	T	V	L	E	E	M	S	L	.	.	.	.	P	G	R	W	K	P	K	M	I	G	G	I	G	G	F	I	K	V	R	Q	Y	D	Q	I	L	I	E	I	C	G	H	K	A	I	G	T	.	.	V	L	V	G	P	T	P	V	N	I	I	G	R	N	L	L	T	Q	I	G	C	T
Template Known Secondary structure					T	T		S	S									.	.	.	.		S										T	T																T	T							.	.				S			S	S									G	G	G	T
Template Predicted Secondary structure																		.	.	.	.																																					.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		577	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		97	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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